Intron and insertion sites known from SSU rDNA

These are the non-peer-reviewed intron locations compiled from research in the DePriest Laboratory (Botany Dept., National Museum of Natural History, USA) as of Summer, 1998. They are correct to the best of our knowledge, but hey, we're human ;-).

Prokaryotic location Saccharomyces location Notes
0057 0053
0114 0098
0266 0337
0287 0358
0296 0369
0323 0396
0330 0404
undetermined 0435
0392 0463
0470 0517
0487 0534
0516 0563
0531 0578
0676 0886
0789 1000
0883 1093
0940 1162
0943 1165
0956 1177
0994 1210
1046 1262
1049 1265
1052 1268
1199 1427
1210 1439
1232 1450
1389 1624
1506 1767
1512 1773
1516 1777

intron position numbers are relative to location within Escherichia coli (as described in Gargas et al., 1995b), and Saccharomyces cerevisiae (Genbank YSCRGEA).


For detailed information see: Gargas, A., P.T. DePriest, and J.W. Taylor, 1995. Positions of multiple insertions in SSU rDNA of lichen-forming fungi. Molecular Biology and Evolution 12: 208-218.


Back to the rDNA intron page (Gargas)
last update 13.nov 2002